Publications 2018

  1. Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists. E Martino, E Morin, GA Grelet, A Kuo, A Kohler, S Daghino, KW Barry, … New Phytologist
  2. Secretome analysis from the ectomycorrhizal ascomycete Cenococcum geophilum MDF Pereira, C Veneault-Fourrey, P Vion, F Guinet, E Morin, K Barry, … Frontiers in Microbiology 9, 141
  3. Roles and maturation of iron–sulfur proteins in plastids J Przybyla-Toscano, M Roland, F Gaymard, J Couturier, N Rouhier JBIC Journal of Biological Inorganic Chemistry, 1-21
  4. High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis ECH Chen, E Morin, D Beaudet, J Noel, G Yildirir, S Ndikumana, … New Phytologist
  5. The rust fungus Melampsora larici-populina expresses a conserved genetic program and distinct sets of secreted protein genes during infection of its two host plants,…C Lorrain, C Marchal, S Hacquard, C Delaruelle, J Pétrowski, B Petre, …Molecular Plant-Microbe Interactions
  6. Function and maturation of the Fe–S center in dihydroxyacid dehydratase from Arabidopsis H Gao, T Azam, S Randeniya, J Couturier, N Rouhier, MK Johnson. Journal of Biological Chemistry, jbc. RA117. 001592
  7. Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors. D Lopez, S Ribeiro, P Label, B Fumanal, JS Venisse, A Kohler, … Frontiers in Microbiology 9, 276
  8. Enzyme activities of two recombinant heme-including peroxidases TvDyP1 and TvVP2 identified from the secretome of Trametes versicolor S Amara, T Perrot, D Navarro, A Deroy, A Benkhelfallah, A Chalak, … Applied and Environmental Microbiology, AEM. 02826-17
  9. Bacterial-Fungal Interactions: ecology, mechanisms and challenges A Deveau, G Bonito, J Uehling, M Paoletti, M Becker, S Bindschedler, … FEMS microbiology reviews Microbiology ecology
  10. Show me the way: rust effector targets in heterologous plant systems. C Lorrain, B Petre, S Duplessis. Current opinion in microbiology 46, 19-25
  11. Tracking the invasion: dispersal of Hymenoscyphus fraxineus airborne inoculum at different scales. M Grosdidier, R Ioos, C Husson, O Cael, T Scordia… FEMS Microbiology Ecology.
  12. Structural snapshots along the reaction mechanism of the atypical poplar thioredoxin‐like2. 1 K Chibani, F Saul, C Didierjean, N Rouhier, A Haouz FEBS letters
  13. Comparison of teak wood properties according to forest management: short versus long rotation DE Rizanti, W Darmawan, B George, A Merlin, S Dumarcay, H Chapuis, … Annals of Forest Science 75 (2), 39
  14. Assessing airborne fungal communities by high-throughput sequencing using passive traps J Aguayo, C Fourrier-Jeandel, C Husson, R Ioos. Applied and Environmental Microbiology, AEM. 02637-17
  15. Do higher summer temperatures restrict the dissemination of Hymenoscyphus fraxineus in France? M Grosdidier, R Ioos, B Marçais. Forest Pathology
  16. The origin and evolution of mycorrhizal symbioses: from palaeomycology to phylogenomics. C Strullu-Derrien, MA Selosse, P Kenrick, FM Martin The New phytologist
  17. Impact of soil pedogenesis on the diversity and composition of fungal communities across the California soil chronosequence of Mendocino PE Courty, M Buée, JJT Tech, D Brulé, Y Colin, JHJ Leveau, S Uroz Mycorrhiza, 1-14
  18. Intraspecific comparative genomics of isolates of the Norway spruce pathogen (Heterobasidion parviporum) and identification of its potential virulence factors Z Zeng, H Sun, EJ Vainio, T Raffaello, A Kovalchuk, E Morin, S Duplessis, … BMC genomics 19 (1), 220
  19. The ectomycorrhizal basidiomycete Laccaria bicolor releases a secreted β-1, 4 endoglucanase that plays a key role in symbiosis development. F Zhang, GE Anasontzis, A Labourel, C Champion, M Haon, … The New phytologist
  20. N-Acetylglucosaminidase activity, a functional trait of chitin degradation, is regulated differentially within two orders of ectomycorrhizal fungi: Boletales and Agaricales F Maillard, M Didion, L Fauchery, C Bach, M Buée. Mycorrhiza, 1-7
  21. The ash dieback invasion of Europe was founded by two genetically divergent individuals M McMullan, M Rafiqi, G Kaithakottil, BJ Clavijo, L Bilham, E Orton, …Nature Ecology & Evolution, 1
  22. First Report of Phytophthora ramorum causing Japanese Larch dieback in France N Schenck, C Saurat, C Guinet, C Fourrier-Jeandel, L Roche, A Bouvet, … Plant Disease
  23. The Hydrophobin-Like OmSSP1 May Be an Effector in the Ericoid Mycorrhizal Symbiosis. S Casarrubia, S Daghino, A Kohler, E Morin, HR Khouja, C Venault-Fourrey,… Front. Plant Sci., 01 May 2018 |
  24. Assessment of Passive Traps Combined with High-Throughput Sequencing To Study Airborne Fungal Communities J Aguayo, C Fourrier-Jeandel, C Husson, R Ioos. Applied and Environmental Microbiology 84 (11), e02637-17
  25. Ericoid mycorrhizal fungi and their genomes: another side to the mycorrhizal symbiosis? S Perotto, S Daghino, E Martino. The New phytologist.
  26. Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor M Schwartz, T Perrot, E Aubert, S Dumarçay, F Favier, P Gérardin, …Scientific Reports 8 (1), 8472
  27. Purification of Fungal High Molecular Weight Genomic DNA from Environmental Samples. L Fauchery, S Uroz, M Buée, A Kohler. Fungal Genomics, 21-35
  28. Conserved functions of Arabidopsis mitochondrial late-acting maturation factors in the trafficking of iron‑sulfur clusters MA Uzarska, J Przybyla-Toscano, F Spangar, F Zannini, R Lill, …Biochimica et Biophysica Acta (BBA)-Molecular Cell Research
  29. Oak genome reveals facets of long lifespan C Plomion, JM Aury, J Amselem, T Leroy, F Murat, S Duplessis, S Faye, …Nature Plants, 1
  30. Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle C Murat, A Kuo, KW Barry, A Clum, RB Dockter, L Fauchery, M Iotti, … Genome Announcements 6 (25), e00537-18
  31. Tree genotype and seasonal effects on soil properties and biogeochemical functioning in Mediterranean pine forests. L Pérez‐Izquierdo, L Saint‐André, P Santenoise… – European Journal of Soil Science
  32. Multi-omic analyses of extensively decayed Pinus contorta reveal expression of diverse array of lignocellulose degrading enzymes C Hori, J Gaskell, D Cullen, G Sabat, PE Stewart, K Lail, Y Peng, K Barry, … Applied and environmental microbiology, AEM. 01133-18
  33. Trametes versicolor Glutathione Transferase Xi 3, a dual Cys‐GST with catalytic specificities of both Xi and Omega classes M Schwartz, T Perrot, A Deroy, T Roret, M Morel‐Rouhier, G Mulliert, … FEBS letters
  34. Impact of soil chemistry, nutrient supplements, and fungicides on the health and yield of field-grown processing tomatoes NN Maharaj, EM Miyao, RM Davis, S Uroz, JHJ Leveau. European Journal of Plant Pathology, 1-14
  35. Fungal glutathione transferases as tools to explore the chemical diversity of Amazonian wood extractives T Perrot, mathieu Schwartz, F Saiag, G Salzet, S Dumarcay, F Favier, … ACS Sustainable Chemistry & Engineering
  36. Dark deactivation of chloroplast enzymes finally comes to light. JP Jacquot. P. Proceedings of the National Academy of Sciences
  37. From leaf to continent: The multi-scale distribution of an invasive cryptic pathogen complex on oak ML Desprez-Loustau, M Massot, M Toïgo, T Fort, AGA Kaya, J Boberg, …Fungal Ecology 36, 39-50
  38. Oak extractive‐induced stress reveals the involvement of new enzymes in the early detoxification response of Phanerochaete chrysosporium AJ Fernández‐González, N Valette, A Kohler, S Dumarçay, R Sormani, … Environmental microbiology
  39. Oxidative protein folding: state‐of‐the‐art and current avenues of research in plants AJ Meyer, J Riemer, N Rouhier. New Phytologist
  40. A rust fungal effector binds plant DNA and modulates transcription MB Ahmed, KCG dos Santos, IB Sanchez, B Petre, C Lorrain, MB Plourde, … Scientific Reports 8 (1), 14718
  41. First evidences that the ectomycorrhizal fungus Paxillus involutus mobilizes nitrogen and carbon from saprotrophic fungus necromass E Akroume, F Maillard, C Bach, C Hossann, C Brechet, N Angeli, B Zeller, … Environmental microbiology
  42. Phytophthora ramorum, first record on Japanese larch in France. M Goudet, C Husson, FX Saintonge, X Grenié, L Roche. Forêt-Entreprise, 62-65
  43. Mitochondrial Arabidopsis thaliana TRXo Isoforms Bind an Iron–Sulfur Cluster and Reduce NFU Proteins In Vitro. F Zannini, T Roret, J Przybyla-Toscano, T Dhalleine, N Rouhier, …Antioxidants 7 (10), 142
  44. Aboveground overyielding in a mixed temperate forest is not explained by belowground processes A Fruleux, MB Bogeat-Triboulot, C Collet, A Deveau, L Saint-André, … Oecologia, 1-11
  45. Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle C Murat, T Payen, B Noel, A Kuo, E Morin, J Chen, A Kohler, K Krizsán, … Nature Ecology & Evolution, 1
  46. Redox homeostasis in photosynthetic organisms: novel and established thiol-based molecular mechanisms. M Zaffagnini, S Fermani, CH Marchand, A Costa, F Sparla, N Rouhier, … Antioxidants and Redox Signaling
  47. The thioredoxin-mediated recycling of Arabidopsis thaliana GRXS16 relies on a conserved C-terminal cysteine F Zannini, A Moseler, R Bchini, T Dhalleine, AJ Meyer, N Rouhier, … Biochimica et Biophysica Acta (BBA)-General Subjects
  48. Phylogenomics of Endogonaceae and evolution of mycorrhizas within Mucoromycota. Y Chang, A Desiro, H Na, L Sandor, A Lipzen,…New Phytologist
  49. Microbial Enzymatic Activities and Community-Level Physiological Profiles (CLPP) in Subsoil Layers Are Altered by Harvest Residue Management Practices in a Tropical Eucalyptus … F Maillard, V Leduc, C Bach, JL de Moraes Gonçalves, FD Androte, … Microbial Ecology, 1-6
  50. Advances in understanding obligate biotrophy in rust fungi C Lorrain, KC Gonçalves dos Santos, H Germain, A Hecker, S Duplessis New Phytologist
  51. Genome‐based estimates of fungal rDNA copy number variation across phylogenetic scales and ecological lifestyles LA Lofgren, JK Uehling, S Branco, TD Bruns, F Martin, PG Kennedy Molecular Ecology