Finland fellowship

La promotion de la mobilité des chercheurs est l’une des priorités d’action de l’Institut Français de Finlande. Les programmes de mobilité proposés par l’Institut visent à concourir au fonctionnement de l’espace européen de l’enseignement supérieur et de la recherche (EER) et à développer la coopération scientifique et universitaire entre la France et la Finlande.

Les appels à projets pour les programmes de mobilité de chercheurs SAMPO, EEPOS et KAKSIN pour 2016 sont ouverts du 19 octobre au 5 décembre 2015.

Plus de renseignements :

http://www.france.fi/helsinki/programmes-de-mobilite-appel-a-projet-sampo-eepos-et-kaksin-2015/

Chateaubriand fellowship

The Chateaubriand Fellowship is a grant offered by the Embassy of France in the United States. Every year, it allows doctoral students enrolled in American universities to conduct research in France for 4 to 9 months. Chateaubriand fellows receive a stipend, a round trip ticket to France and health insurance.
Ouverture de l’appel 2016-2017 pour les bourses Chateaubriand : ce programme de bourses, mis en place par l’Ambassade de France à Washington, a pour but de financer la venue de doctorants américains dans des laboratoires français, pour une période allant de 4 à 9 mois, dans le cadre d’un projet de recherche conjoint. Il vise notamment à initier ou à renforcer des coopérations de recherche entre vos équipes et des équipes américaines (voir version FR et EN document joints)
contacts
HSS Chateaubriand Program : hss.coordinator@chateaubriand-fellowship.org

Seminar : F. Maillard

François Maillard, qui débute sa thèse de Doctorat dans notre unité, nous présentera ses travaux de Master (travaux réalisés dans l’équipe de Michel Chalot) ce vendredi 30 octobre (salle LEGF, 13h30) :
” Les communautés microbiennes associées au peuplier dans un contexte de phytostabilisation “

Article: PNAS

The mitochondrial monothiol glutaredoxin S15 is essential for iron-sulfur protein maturation in Arabidopsis thaliana

A Moseler, I Aller, S Wagner, T Nietzel, J Przybyla-Toscano, U Mühlenhoff, …
Proceedings of the National Academy of Sciences, 201510835

Abstract

The iron-sulfur cluster (ISC) is an ancient and essential cofactor of many proteins involved in electron transfer and metabolic reactions. In Arabidopsis, three pathways exist for the maturation of iron-sulfur proteins in the cytosol, plastids, and mitochondria. We functionally characterized the role of mitochondrial glutaredoxin S15 (GRXS15) in biogenesis of ISC containing aconitase through a combination of genetic, physiological, and biochemical approaches. Two Arabidopsis T-DNA insertion mutants were identified as null mutants with early embryonic lethal phenotypes that could be rescued by GRXS15. Fur- thermore, we showed that recombinant GRXS15 is able to coordi- nate and transfer an ISC and that this coordination depends on reduced glutathione (GSH). We found the Arabidopsis GRXS15 able to complement growth defects based on disturbed ISC protein as- sembly of a yeast Δgrx5 mutant. Modeling of GRXS15 onto the crystal structures of related nonplant proteins highlighted amino acid residues that after mutation diminished GSH and subsequently ISC coordination, as well as the ability to rescue the yeast mutant. When used for plant complementation, one of these mutant variants, GRXS15K83/A, led to severe developmental delay and a pronounced decrease in aconitase activity by approximately 65%. These results indicate that mitochondrial GRXS15 is an essential protein in Arabidopsis, required for full activity of iron-sulfur proteins.

Article: Scientific reports

Highly Efficient CYP167A1 (EpoK) dependent Epothilone B Formation and Production of 7-Ketone Epothilone D as a New Epothilone Derivative. F Kern, T K. F. Dier, Y Khatri , K M. Ewen, JPJacquot, DA. Volmer, R Bernhardt. Scientific Reports | 5:14881 | DOI: 10.1038/srep14881

Abstract

Since their discovery in the soil bacterium Sorangium cellulosum, epothilones have emerged as a valuable substance class with promising anti-tumor activity. Because of their benefits in the treatment of cancer and neurodegenerative diseases, epothilones are targets for drug design and pharmaceutical research. The final step of their biosynthesis – a cytochrome P450 mediated epoxidation of epothilone C/D to A/B by CYP167A1 (EpoK) – needs significant improvement, in particular regarding the efficiency of its redox partners. Therefore, we have investigated the ability of various hetero- and homologous redox partners to transfer electrons to EpoK. Hereby, a new hybrid system was established with conversion rates eleven times higher and Vmax of more than seven orders of magnitudes higher as compared with the previously described spinach redox chain. This hybrid system is the most efficient redox chain for EpoK described to date. Furthermore, P450s from Soce56 were identified which are able to convert epothilone D to 14-OH, 21-OH, 26-OH epothilone D and 7-ketone epothilone D. The latter one represents a novel epothilone derivative and is a suitable candidate for pharmacological tests. The results revealed myxobacterial P450s from S. cellulosum Soce56 as promising candidates for protein engineering for biotechnological production of epothilone

derivatives.

France-Berkeley Fund

France-Berkeley Fund Application 2016 Overview

Projects can be sponsored to a maximum of US $12,000.

Sponsored projects can begin between July 1, 2016 and December 31, 2016. Projects must be completed within one year of their start date.

The FBF 2015 Call for Projects is open to applicants from UC Berkeley and UC Davis. We regret not being able to accept applications from Santa Cruz since 2010, or from Lawrence Berkeley National Laboratory as of 2014.

Applicants are responsible for correctly formatting their submissions. All the documents should be merged.

Each of the two application files should include a cover sheet, available in .DOCX and .PDF formats. Note that the .docx format may require you to “unprotect” the document, depending on your system.

After creating your application files according to the guidelines, proceed to the Online Application Site. Here, you will be able to upload your files, as well as enter the information gathered on your cover sheet. Note that you cannot save your application to work on it later, so make sure you have gathered all of the required materials as outlined in the guidelines before filling out the online application. You will immediately receive an e-mailed confirmation of your application, and if any details need to be changed (e.g. minor typos), you can e-mail the changes to FBF@BERKELEY.EDU by the application deadline.

The Fund  will provide confirmation of receipt and eligibility by email by February 10, 2016. Notification of awards will be made in mid-June of 2016.

Date limite de candidature : Vendredi 29 Janvier 2016

Pour plus d’informations : http://fbf.berkeley.edu/application-overview

Article: Plos one

Profiling the Succession of Bacterial Communities throughout the Life Stages of a Higher Termite Nasutitermes arborum (Termitidae, Nasutitermitinae) Using 16S rRNA Gene Pyrosequencing

M Diouf, V Roy, P Mora, S Frechault, T Lefebvre, V Hervé, … PLoS ONE 10 (10), e0140014

Abstract

Previous surveys of the gut microbiota of termites have been limited to the worker caste. Termite gut microbiota has been well documented over the last decades and consists mainly of lineages specific to the gut microbiome which are maintained across generations. Despite this intimate relationship, little is known of how symbionts are transmitted to each generation of the host, especially in higher termites where proctodeal feeding has never been reported. The bacterial succession across life stages of the wood-feeding higher termite Nasutitermes arborum was characterized by 16S rRNA gene deep sequencing. The microbial community in the eggs, mainly affiliated to Proteobacteria and Actinobacteria, was markedly different from the communities in the following developmental stages. In the first instar and last instar larvae and worker caste termites, Proteobacteria and Actinobacteria were less abundant than Firmicutes, Bacteroidetes, Spirochaetes, Fibrobacteres and the candidate phylum TG3 from the last instar larvae. Most of the representatives of these phyla (except Firmicutes) were identified as termite-gut specific lineages, although their relative abundances differed. The most salient difference between last instar larvae and worker caste termites was the very high proportion of Spirochaetes, most of which were affiliated to the Treponema Ic, Ia and If subclusters, in workers. The results suggest that termite symbionts are not transmitted from mother to offspring but become established by a gradual process allowing the offspring to have access to the bulk of the microbiota prior to the emergence of workers, and, therefore, presumably through social exchanges with nursing workers.

Article: Cellular microbiology

Rust fungal effectors mimic host transit peptides to translocate into chloroplasts. B Petre, C Lorrain, D Saunders, S Duplessis, S Kamoun. Cellular Microbiology, DOI: 10.1111/cmi.12530

Abstract

Parasite effector proteins target various host cell compartments to alter host processes and promote infection. How effectors cross membrane-rich interfaces to reach these compartments is a major question in effector biology. Growing evidence suggests that effectors use molecular mimicry to subvert host cell machinery for protein sorting. We recently identified CTP1 (chloroplast-targeted protein 1), a candidate effector from the poplar leaf rust fungus Melampsora larici-populina that carries a predicted transit peptide and accumulates in chloroplasts and mitochondria. Here, we show that the CTP1 transit peptide is necessary and sufficient for accumulation in the stroma of chloroplasts. CTP1 is part of a Melampsora-specific family of polymorphic secreted proteins. Two members of that family, CTP2 and CTP3, also translocate in chloroplasts in a N-terminal signal-dependent manner. CTP1, CTP2 and CTP3 are cleaved when they accumulate in chloroplasts, while they remain intact when they do not translocate into chloroplasts. Our findings reveal that fungi have evolved effector proteins that mimic plant-specific sorting signals to traffic within plant cells.