|Gene Name: GSTUMT00009008001|
Length(AA) : 510
Localization : scaffold_51
Number of EST contigs matching the gene: 5
Number of ESTs : 31
|Nr Definition: Ankyrin repeat protein |
Specie: [Aspergillus fumigatus A1163]
Accession: gb|EDP48589.1| Score: 479 E_value: 6e-46
|KEGG Definition: hypothetical protein|
Accession: ang:An02g10560 Score: 463 E_value: 2e-44
|KOG Definition: Ankyrin |
Classification: [Cell wall/membrane/envelope biogenesis].
Kog Number: KOG4177 Score: 314 E_value: 2e-29
|PFAM Definition: RRM_1, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain). The RRM motif is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins have a N terminus rrm which is included in the seed. There is a second region towards the C terminus that has some features of a rrm but does not appear to have the important structural core of a rrm. The LA proteins are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease..|
Pfam Number: pfam00076 Score: 197 E_value: 7e-16
SignalP 3.0 predicts the presence and location of signal peptide cleavage sites in amino acid sequences.
The method incorporates a prediction of cleavage sites and a signal peptide/non-signal peptide prediction
based on a combination of several artificial neural networks and hidden Markov models.
|Smean score||Smean prediction||Smax score||Smax prediction||D-score||D prediction||HMM prediction|
TargetP 1.1 predicts the subcellular location of eukaryotic proteins. The location assignment is based on
the predicted presence of any of the N-terminal presequences: mitochondrial targeting peptide (mTP)
or secretory pathway signal peptide (SP).
|Mitochondrion Score||Secretory Score||Any other location||Localization||Reliability class||Predicted presenquence length|
Prediction of transmembrane helices in proteins
EST contigs matching with the Gene:
|Contig1249||unnamed protein product [Aspergillus oryzae]||4e-20|
|Contig1385||unnamed protein product [Aspergillus oryzae]||4e-20|
|Contig1852||unnamed protein product [Aspergillus oryzae]||1e-30|
|Contig5861||unnamed protein product [Aspergillus oryzae]||3e-11|
|SY0AAB29YD12FM1||unnamed protein product [Aspergillus oryzae]||5e-15|