|Gene Name: GSTUMT00003465001|
Length(AA) : 135
Localization : scaffold_173
Number of EST contigs matching the gene: 1
Number of ESTs : 1
|Nr Definition: beta-tubulin prf||1312295A tubulin beta|
Accession: gb|AAA33328.1| Score: 378 E_value: 7e-61
|KEGG Definition: tubulin subunit beta; K07375 tubulin beta|
Accession: tpv:TP02_0464 Score: 306 E_value: 4e-52
|KOG Definition: Gamma tubulin |
Kog Number: KOG1374 Score: 232 E_value: 9e-21
|PFAM Definition: Tubulin, Tubulin/FtsZ family, GTPase domain. This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules..|
Pfam Number: pfam00091 Score: 297 E_value: 3e-28
SignalP 3.0 predicts the presence and location of signal peptide cleavage sites in amino acid sequences.
The method incorporates a prediction of cleavage sites and a signal peptide/non-signal peptide prediction
based on a combination of several artificial neural networks and hidden Markov models.
|Smean score||Smean prediction||Smax score||Smax prediction||D-score||D prediction||HMM prediction|
TargetP 1.1 predicts the subcellular location of eukaryotic proteins. The location assignment is based on
the predicted presence of any of the N-terminal presequences: mitochondrial targeting peptide (mTP)
or secretory pathway signal peptide (SP).
|Mitochondrion Score||Secretory Score||Any other location||Localization||Reliability class||Predicted presenquence length|
Prediction of transmembrane helices in proteins
EST contigs matching with the Gene:
|SY0AAB8YM21FM1||beta tubulin [Sclerotinia sclerotiorum 1980]||7e-97|