Tuber melanosporum DB

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Contig Name: Contig4115
Length(NT) : 873
Best Gene Model Blast : Link to GSTUMT00002979001 E-value : 0.0
Numbers of ESTs : 3

Blast Results:

Nr Definition: plasma membrane zinc ion transporter
Accession: ref|XP_731508.1| Score: 629 E_value: 1e-63
KEGG Definition: plasma membrane zinc ion transporter, putative
Accession: afm:AFUA_6G00470 Score: 629 E_value: 5e-64
KOG Definition:
Classification: [Inorganic ion transport and metabolism].
Kog Number: KOG1558 Score: 320 E_value: 2e-30
PFAM Definition: Zip, ZIP Zinc transporter. The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family..
Pfam Number: pfam02535 Score: 302 E_value: 2e-28
Swissprot: Q12436|ZRT2_YEAST
Gene Ontology:
GO:0005886 = Cellular component: plasma membrane
GO:0000007 = Molecular function: low-affinity zinc ion transmembrane transporter activity
GO:0006831 = Biological process: low-affinity zinc ion transport

Sequence:
>Contig4115
TTGGCGGACTGCTGGAGCGAATGACAGTAGTCTCACGGTAATTGGGACTC
CCGGTACTGATGATGTGATCATAGAGATGACCAACAACTACGCGGGCCAA
GAGGAAAATGTGGTTGATGATGGGAGTCAAGACCGCGCTATTGTGAATGC
GTTCAAGACACTGCCCGGGGTCGCTCAACTGACGCCGGAGCAAATTCACA
AGAAGGCGCTACTTCAGTGTGTATTGTTGGAAATGGGAATTCTCTTCCAT
AGCGTATTTATTGGAATGGCGTTGAGTGTCACTATCGGGCCTGGATTTGT
CATCCTTCTGATTGCCATTATCTTCCATCAAACCTTTGAAGGACTAGCCC
TTGGCTCTCGTATTGCCGTTTTGAACTGGAAAGCTGATGCTGTCCAGCCC
TGGCTTATGGCAGTTGCATATGGCTTGACTACGCCTGTCGGTCAGGCCAT
CGGTCTTGCAACTCATACTCTATACTCCCCATCAAGCCAAACAGGTCTTT
TAATGGTTGGAATAATGAACGCAATTTCATCTGGTCTGCTCGTATTCGCC
GGCCTTGTAGAACTCCTCGCAGAAGACTTTCTCAGCGATGAGAGTTGGCT
TGTGTTAACAGGGAGGAAGCGAATTATAGCGTGCATATATGTTATGGCTG
GGGCATTCGGGATGGCTTTTGTGGGAGCTTTTGCTTGAGGAATCCTTGTT
TTCTTTCCCTTCAACGCTCGTTTCTCCTGGGGATTTTCCTATTTGTTCAC
GATATTACGCCGAGTAACGGTGATTCTTGATTGGTTTGACTAGTTTGGGT
TAAATCTCTTTAGTCACGCGCAGGGCAGTACAGGTATTTGGATCATAGGA
AAATAAAAGCAAAGGATTTATGT

Sequences in the Contig:

SY0AAC25YH14FM1 SY0AAC25YH14RM1 SY0AAC32YJ11FM1