Tuber melanosporum DB

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Contig Name: Contig1495
Length(NT) : 824
Best Gene Model Blast : Link to GSTUMT00008074001 E-value : 0.0
Numbers of ESTs : 3

Blast Results:

Nr Definition: conserved hypothetical protein
Accession: ref|XP_001209556.1| Score: 239 E_value: 2e-35
KEGG Definition: vacuolar H+/Ca2+ exchanger; K07300 Ca2+:H+ antiporter
Accession: afm:AFUA_2G07630 Score: 215 E_value: 5e-35
KOG Definition:
Classification: [Inorganic ion transport and metabolism].
Kog Number: KOG1397 Score: 258 E_value: 3e-23
PFAM Definition: Na_Ca_ex, Sodium/calcium exchanger protein. This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3..
Pfam Number: pfam01699 Score: 121 E_value: 2e-07
Swissprot: Q99385|VCX1_YEAST
Gene Ontology:
GO:0000324 = Cellular component: vacuole, cell cycle-correlated morphology
GO:0015085 = Molecular function: calcium ion transmembrane transporter activity
GO:0006816 = Biological process: calcium ion transport
GO:0006874 = Biological process: cellular calcium ion homeostasis

Sequence:
>Contig1495
TTGGCGGTCGGGACATGGAGATGCAACAACCCCTGAACGGTGGGCGGGAT
CATGGGAAGATTGAGAGGGATGTCACTTCGCCAATACCGGACCCCGAGAT
GACGAGACCGGGGAGGCGTGGTTGCAATCCTTTCCGCGCTTTCGTTATCA
TGTTGAGGAGCTCAAGCAGTTTGGGCGCTTGCACCAACGTCCTCCTACCC
TTCGTACCTGTTGGCTTGTTGCTTCACTGGTGGAAGCCCGATCTGCATTT
ATGGATATTTTTGACCAATTATCTAGCTATGATCCCCATGGCGAATTTAC
TAGCCTTCTCGAGCGCCCAATTTTCTCGAAGGCTCCCGAGAGTGCTTGGT
GTGATAATCCAACTTACTTTTGCTTCTTCCGTCGAGGTCATTCTATGCCT
CGTGCTGCTATTCAAGGTAACCCGATACTCCCCTCTGGCAAGCGCGTCTA
ACAATGACAGAGCCAATTCCAAGTCATCCAAGCGGCTCTCCTGGGCAGTA
TGTTGGCCAATCTCCTCCTCTGTACGGGCCTCTGCTTCATCGTCGGCGGG
ATCCGCACGAAAGCGCAAGAGTTCAGCGAAACCGTGGTAGAAACTGGCGG
CGGATTGCTCCTAGTCAGCGTGGCATCCTTGATGCTCCCATGCGCCTTTT
TTGAGTCAGTATCCGCAATGGGCCGCCTCCCCCAGGACGAGCTCGATCAC
AAGGTCCTCCACATATCTCGCTTCTCGGCGGTACTACTTCTGATAGCCTA
CGTCACGTATCTCTTCTTCCAGCTCGCCACTCATCACTCCGAGTTTGACC
AGGCACTCTACGAGAGCGAGCAGA

Sequences in the Contig:

SY0AAA28YI11FM1 SY0AAA52YN03FM1 SY0AAB41YD06FM1