Tuber melanosporum DB

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Contig Name: Contig1303
Length(NT) : 631
Best Gene Model Blast : Link to GSTUMT00000150001 E-value : 0.0
Numbers of ESTs : 2

Blast Results:

Nr Definition: hypothetical protein An02g09420
Accession: ref|XP_001400072.1| Score: 320 E_value: 4e-28
KEGG Definition: hypothetical protein
Accession: ang:An02g09420 Score: 320 E_value: 2e-28
KOG Definition: No Hit Found
PFAM Definition: p450, Cytochrome P450. Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the meander, a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyse regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures..
Pfam Number: pfam00067 Score: 106 E_value: 7e-06
Swissprot: Q12612|TRI4_FUSSP

Sequence:
>Contig1303
TTGGGGGGACAACTTTGTACAAAAAAGTTGGACCCGCTGAAGGAAAGAAG
GGATCGCCAGAAGAAGAGAATATTTTCCCTACTGTTTTGTTGGAGTGATA
GTCGTTGAACAAAATGGCTTTGGACGCCGTGATAGCTTATGCTCGGGAGC
TAGCTCCTGCTAGCATTTCTAGGGGCGCTATTGCTGCCACAGTGCTTGGG
GTGTGGCTTTTGAATAGAATTTGGCTTGTTTTTTACAGACTTTATCTGGA
CCCGCTGTCAAAGTTCCCTGGGCCGAAATTGGCTGCCGCAACCTCCTTGT
ATGAAATGTATTATGATATAGCTCAAGATGGAGCATTTACATGGAAAATG
GACGAATTACATAAGAAATATGGTCCCATCGTCCGTGTCTCCCCGTATTC
TCTCCGCCTCCGAAAGAGTTCTGCATACCATGAGGTTCATAGGATGGGCA
CCCCCTTTGTCAAAGATGTTAGGTTCTACGGCCAGTTCAAGATTTACAAT
GCTGTATTCGCAATCATAGACACCGAACTCCACCGCCAACGGCGCGCACT
ACTAAACCCAGTTTTCTCCAGAAAAGCGATTTTAGACTCAGAGCCTGTTA
TCAAGGAGAAGCTCAATCACCTCTGCCGTCG

Sequences in the Contig:

SY0AAA31YA17FM1 SY0AAA47YA15FM1